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Seattle Structural Genomics Center for Infectious Disease

AcbaC.17085.a: coproporphyrinogen III oxidase, aerobic

Target Characteristics

from organism: Acinetobacter baumannii AB5075-UW
most recent status: in PDB
center reference id: AcbaC.17085.a
is community request: True
associated disease:
NIH risk group: 2
is select agent: False
NIH priority
pathogens category:
unclassified

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
AcbaC.17085.a.B1.GE38743 full length 1 316 GE38743
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.

Proteins

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
AcbaC.17085.a.B1.PS38131 full length 1 316

Structures

image of structure for 5EO6
5EO6
Deposited: 11/10/2015
Determination: XRay
Diffraction Image
Clone: AcbaC.17085.a.B1.GE38743
Protein: AcbaC.17085.a.B1.PS02404

Citations by Others

Prokaryotic Heme Biosynthesis: Multiple Pathways to a Common Essential Product
HA Dailey, TA Dailey, S Gerdes, D Jahn… - Microbiology and …, 2017 - Am Soc Microbiol
cited by: 13 others
PDB: 5EO6
Prokaryotic Heme Biosynthesis: Multiple Pathways to a Common Essential Product
A Bailey, R Webster, R Hunter, N Freemantle, G Rait - 2017 - Microbiol Mol Biol Rev
PDB: 5EO6

This list was obtained from Google Scholar searches using the Open Source tool https://github.com/ckreibich/scholar.py and each citation has been manually reviewed.

External Resources

Resource Reference ID
GenBank: AKA30163.1
PATRIC ID: fig|470.1345.peg.363
PGAT: acinetobacter:ABUW_0377
RefSeq: WP_001164614.1
UniProt: A0A0D5YE19

Enzyme & Pathway Information

Pathway Pathway ID EC Number
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) CHLOROPHYLL-SYN 1.3.3.3
heme b biosynthesis I (aerobic) HEME-BIOSYNTHESIS-II 1.3.3.3
superpathway of heme b biosynthesis from uroporphyrinogen-III PWY0-1415 1.3.3.3
superpathay of heme b biosynthesis from glutamate PWY-5918 1.3.3.3
superpathway of b heme biosynthesis from glycine PWY-5920 1.3.3.3
3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent) PWY-7159 1.3.3.3

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "more" button next to the name of that material.
AA Sequence
MQHPTSTDIQ RVREFLLDLQ ARICAGLEQQ EKAGGGTAEF IIDDWERPEG GGGRSRVLQN GTVIEKGGVM FSHINISKLP ASATERHPQI AGAKAQALGV SLVIHPKNPN IPTSHANVRL FVAEREDQDP IWWFGGGFDL TPFYPDDQDV LNWHQAAYDL CKPFGDNVYA EHKKWCDDYF YLKHRDEQRG VGGLFFDDLN CWDFETCFKY IQAVGNGYLN AILPIFEKHR EQPYTEAQRE FQLYRRGRYV EYNLVYDRGT LFGLQTGGRI ESILVSLPNL AAWSYRPEWD EDSPEKRLTD YYLKPRDWLG LEEKVA

NT Sequence
ATGCAACATC CGACTTCAAC AGATATTCAA CGTGTCCGCG AATTTCTCCT CGATTTACAA GCCCGTATTT GTGCCGGTTT AGAACAACAA GAAAAAGCTG GTGGTGGGAC AGCAGAATTT ATCATTGATG ATTGGGAGCG CCCTGAAGGC GGTGGCGGCC GTTCACGTGT ACTGCAAAAT GGTACAGTGA TTGAAAAAGG CGGCGTGATG TTTTCACATA TCAACATTAG TAAACTGCCT GCTTCTGCAA CAGAACGTCA CCCTCAAATT GCAGGGGCAA AAGCTCAAGC GCTAGGTGTG TCTTTAGTCA TTCACCCTAA AAACCCGAAT ATTCCAACCT CGCATGCGAA TGTCCGCTTA TTCGTTGCAG AGCGTGAAGA TCAAGATCCG ATTTGGTGGT TTGGTGGAGG TTTTGACTTA ACGCCATTTT ATCCAGATGA CCAAGATGTT TTAAATTGGC ACCAAGCCGC TTATGACCTC TGTAAGCCTT TTGGTGACAA TGTTTATGCT GAACATAAAA AATGGTGCGA TGACTATTTC TATTTAAAGC ATCGCGATGA ACAACGTGGT GTGGGCGGTT TATTCTTTGA TGATTTAAAT TGCTGGGATT TCGAAACCTG CTTTAAATAT ATTCAAGCCG TAGGTAATGG CTATTTAAAT GCGATCTTGC CAATTTTCGA AAAACACCGC GAACAGCCTT ATACCGAAGC TCAACGCGAA TTTCAGCTTT ATCGCCGTGG CAGATATGTC GAATATAACT TGGTGTATGA CCGCGGTACG TTGTTTGGAT TACAAACAGG TGGCCGTATT GAGTCGATTT TAGTTAGCTT ACCTAATCTA GCTGCATGGT CTTATCGCCC TGAATGGGAT GAAGACTCTC CAGAGAAGCG TTTAACTGAC TACTATTTAA AACCTCGTGA TTGGTTAGGT TTAGAAGAAA AAGTCGCCTA A

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