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Seattle Structural Genomics Center for Infectious Disease

AcbaC.18873.a: diaminopimelate epimerase

Target Characteristics

from organism: Acinetobacter baumannii AB5075-UW
most recent status: in PDB
center reference id: AcbaC.18873.a
is community request: True
associated disease:
NIH risk group: 2
is select agent: False
NIH priority
pathogens category:
unclassified

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
AcbaC.18873.a.B1.GE38937 full length 1 281 GE38937
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.

Proteins

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
AcbaC.18873.a.B1.PW37762 full length 1 281
AcbaC.18873.a.B1.PW37763 full length 1 281

Structures

image of structure for 5HA4
5HA4
Deposited: 12/30/2015
Determination: XRay
Diffraction Image
Clone: AcbaC.18873.a.B1.GE38937
Protein: AcbaC.18873.a.B1.PW37762

Citations by Others


This list was obtained from Google Scholar searches using the Open Source tool https://github.com/ckreibich/scholar.py and each citation has been manually reviewed.

External Resources

Resource Reference ID
GenBank: AKA30708.1
PATRIC ID: fig|470.1345.peg.918
PGAT: acinetobacter:ABUW_0954
RefSeq: WP_000923484.1
UniProt: A0A0D8GNZ8

Enzyme & Pathway Information

Pathway Pathway ID EC Number
L-lysine biosynthesis I DAPLYSINESYN-PWY 5.1.1.7
superpathway of L-lysine, L-threonine and L-methionine biosynthesis I P4-PWY 5.1.1.7
aspartate superpathway PWY0-781 5.1.1.7
L-lysine biosynthesis II PWY-2941 5.1.1.7
L-lysine biosynthesis VI PWY-5097 5.1.1.7
superpathway of L-lysine, L-threonine and L-methionine biosynthesis II PWY-724 5.1.1.7

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "more" button next to the name of that material.
AA Sequence
MLLEFTKMHG LGNDFMVVDL ISQRAYLDTA TIQRLADRHF GVGFDQLLIV EPPDVPEADF KYRIFNADGS EVEQCGNGVR CFARFVHERH LTNKTNITVQ TKAGIVKPEL GQNGWVRVNM GYPKFLPNEI PFVAEEPEAL YTLELANDQN ISIDVVNMGN PHAVTIVPDV LTADVAGIGP QVESHKRFPE RVNAGFMQVI DDKHVRLRVF ERGVGETLAC GTGACAAAVS GMRRGLLANS VEVELAGGKL QIEWQEGDVV WMTGPTTHVY DGRLDLRYFQ G

NT Sequence
ATGTTATTAG AATTTACCAA AATGCATGGT TTAGGCAATG ATTTCATGGT GGTTGATCTA ATTAGCCAAA GAGCTTATTT AGATACTGCA ACAATTCAAC GTTTGGCAGA CCGACACTTT GGTGTGGGGT TTGATCAGCT TTTAATTGTT GAACCACCAG ATGTACCCGA AGCTGATTTT AAATACCGTA TTTTCAATGC AGATGGTTCT GAGGTTGAGC AATGTGGTAA TGGTGTGCGT TGTTTTGCCC GTTTTGTCCA CGAACGTCAT TTAACCAATA AAACCAACAT TACCGTACAA ACCAAAGCGG GTATTGTAAA GCCAGAGCTT GGGCAAAATG GTTGGGTGCG CGTAAATATG GGCTACCCAA AGTTTCTACC AAATGAAATT CCATTTGTTG CCGAAGAGCC AGAAGCTTTA TATACCCTTG AGTTGGCAAA TGACCAAAAC ATTAGTATTG ATGTGGTCAA CATGGGTAAC CCACACGCGG TCACTATAGT TCCAGATGTA CTAACTGCTG ATGTAGCTGG TATTGGTCCG CAAGTTGAAT CACATAAACG TTTCCCTGAG CGCGTTAATG CTGGTTTCAT GCAAGTGATT GATGACAAGC ATGTTCGCTT ACGTGTATTT GAACGTGGTG TGGGTGAAAC ACTTGCGTGT GGTACAGGAG CTTGTGCTGC TGCGGTAAGT GGCATGCGCC GTGGTCTACT TGCGAACTCT GTAGAAGTTG AACTTGCTGG TGGTAAGCTA CAAATTGAAT GGCAAGAAGG CGATGTGGTC TGGATGACTG GTCCAACAAC TCATGTATAT GATGGACGTT TGGATTTACG TTATTTCCAA GGTTAA

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