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Seattle Structural Genomics Center for Infectious Disease

AnphA.00455.a: ribose 5-phosphate isomerase B

Target Characteristics

from organism: Anaplasma phagocytophilum HZ
most recent status: in PDB
center reference id: AnphA.00455.a
is community request: False
associated disease: Human granulocytic anaplasmosis
NIH risk group: 1
is select agent: False
NIH priority
pathogens category:
I

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
AnphA.00455.a.A1.GE34593 Full length( AnphA.00455.a ) 1 143 GE34593
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.

Proteins

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
AnphA.00455.a.A1.PW35203 Full length( AnphA.00455.a ) 1 143

Structures

image of structure for 4EM8
4EM8
Deposited: 4/11/2012
Determination: XRay
Diffraction Image
Clone: AnphA.00455.a.A1.GE34593
Protein: AnphA.00455.a.A1.PW35203

Citations by Others

Scoring functions for protein docking and drug design
S Viswanath - 2014 - repositories.lib.utexas.edu
PDB: 4EM8

This list was obtained from Google Scholar searches using the Open Source tool https://github.com/ckreibich/scholar.py and each citation has been manually reviewed.

External Resources

Resource Reference ID
OrthoMCL: OG5_129695
PATRIC ID: fig|212042.8.peg.694
RefSeq: YP_505227.1
UniProt: Q2GK74

Enzyme & Pathway Information

Pathway Pathway ID EC Number
Calvin-Benson-Bassham cycle CALVIN-PWY 5.3.1.6
pentose phosphate pathway (non-oxidative branch) NONOXIPENT-PWY 5.3.1.6
Bifidobacterium shunt P124-PWY 5.3.1.6
formaldehyde assimilation III (dihydroxyacetone cycle) P185-PWY 5.3.1.6
pentose phosphate pathway PENTOSE-P-PWY 5.3.1.6
oxygenic photosynthesis PHOTOALL-PWY 5.3.1.6
formaldehyde assimilation II (assimilatory RuMP Cycle) PWY-1861 5.3.1.6
Rubisco shunt PWY-5723 5.3.1.6
1-butanol autotrophic biosynthesis (engineered) PWY-6886 5.3.1.6
superpathway of glucose and xylose degradation PWY-6901 5.3.1.6
ethylene biosynthesis V (engineered) PWY-7124 5.3.1.6
photosynthetic 3-hydroxybutanoate biosynthesis (engineered) PWY-7218 5.3.1.6

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "more" button next to the name of that material.
AA Sequence
MVKRVFLSSD HAGVELRLFL SAYLRDLGCE VFDCGCDPKE HSVDYPDYVH DVVREVSDTS FGVLICGTGI GMSIAANRHK NIRAALCSST MLAKLSREHN DANVLCFGSR YIDPDTAQSV LYTFMTTAFL GGRHAVRVQK LGE

NT Sequence
GTGGTAAAAA GGGTTTTTCT CTCCTCTGAT CATGCTGGCG TAGAACTCAG ATTGTTTCTT AGCGCGTATC TAAGAGACTT AGGTTGCGAA GTTTTTGACT GCGGTTGCGA TCCTAAAGAG CATTCCGTAG ACTACCCAGA TTACGTACAT GACGTTGTAA GAGAAGTATC AGATACGAGT TTTGGAGTTT TGATATGCGG AACGGGTATA GGCATGAGTA TAGCAGCCAA CCGTCATAAA AATATTAGAG CCGCTCTTTG TTCTTCTACC ATGCTTGCAA AGCTTTCTAG AGAACACAAT GATGCGAATG TTCTGTGTTT TGGCTCTCGT TATATAGATC CTGATACTGC ACAGTCCGTA TTATACACGT TCATGACAAC GGCGTTCTTA GGGGGAAGAC ATGCCGTAAG AGTACAAAAA CTTGGTGAA

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