NIAID Emerging and Re-emerging Infectious Diseases NIAID Bioinformatics Resource Centers NIAID Structural Genomic Centers Center for Structural Genomics of Infectious Disease
Seattle Structural Genomics Center for Infectious Disease

BaheA.01246.a: triosephosphate isomerase

Target Characteristics

from organism: Bartonella henselae str. Houston-1
most recent status: in PDB
center reference id: BaheA.01246.a
is community request: False
associated disease: Bacillary angiomatosis
NIH risk group: 3
is select agent: False
NIH priority
pathogens category:
I

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
BaheA.01246.a.A1.GE26693 Full length( BaheA.01246.a ) 1 254 GE26693
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.

Proteins

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
BaheA.01246.a.A1.PS00381 Full length( BaheA.01246.a ) 1 254

Structures

image of structure for 3KXQ
3KXQ
Deposited: 12/3/2009
Determination: XRay
Diffraction Image
Clone: BaheA.01246.a.A1.GE26693
Protein: BaheA.01246.a.A1.PS00381

Citations by Others

Rare Sidechain Conformations in Proteins and DNA
BJ Hintze - 2015 - search.proquest.com
PDB: 3KXQ
Structural analysis on mutation residues and interfacial water molecules for human TIM disease understanding
Z Li, Y He, Q Liu, L Zhao, L Wong - BMC , 2013 - bmcbioinformatics.biomedcentral.
cited by: 1 other
PDB: 3KXQ

This list was obtained from Google Scholar searches using the Open Source tool https://github.com/ckreibich/scholar.py and each citation has been manually reviewed.

External Resources

Resource Reference ID
OrthoMCL: OG5_127002
PATRIC ID: fig|283166.5.peg.622
RefSeq: YP_033402.1
UniProt: Q8L1Z5

Enzyme & Pathway Information

Pathway Pathway ID EC Number
homolactic fermentation ANAEROFRUCAT-PWY 5.3.1.1
glycolysis III (from glucose) ANAGLYCOLYSIS-PWY 5.3.1.1
Calvin-Benson-Bassham cycle CALVIN-PWY 5.3.1.1
gluconeogenesis I GLUCONEO-PWY 5.3.1.1
glycolysis I (from glucose 6-phosphate) GLYCOLYSIS 5.3.1.1
superpathway of glycolysis and the Entner-Doudoroff pathway GLYCOLYSIS-E-D 5.3.1.1
superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass GLYCOLYSIS-TCA-GLYOX-BYPASS 5.3.1.1
superpathway of hexitol degradation (bacteria) HEXITOLDEGSUPER-PWY 5.3.1.1
formaldehyde assimilation III (dihydroxyacetone cycle) P185-PWY 5.3.1.1
glycolysis V (Pyrococcus) P341-PWY 5.3.1.1
superpathway of N-acetylneuraminate degradation P441-PWY 5.3.1.1
hexitol fermentation to lactate, formate, ethanol and acetate P461-PWY 5.3.1.1
oxygenic photosynthesis PHOTOALL-PWY 5.3.1.1
glycolysis IV (plant cytosol) PWY-1042 5.3.1.1
superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle PWY-5464 5.3.1.1
glycolysis II (from fructose 6-phosphate) PWY-5484 5.3.1.1
gluconeogenesis II (Methanobacterium thermoautotrophicum) PWY-6142 5.3.1.1
Methanobacterium thermoautotrophicum biosynthetic metabolism PWY-6146 5.3.1.1
sucrose degradation V (sucrose alpha-glucosidase) PWY66-373 5.3.1.1
gluconeogenesis III PWY66-399 5.3.1.1
glycolysis VI (metazoan) PWY66-400 5.3.1.1
1-butanol autotrophic biosynthesis (engineered) PWY-6886 5.3.1.1
glycerol degradation to butanol PWY-7003 5.3.1.1
ethylene biosynthesis V (engineered) PWY-7124 5.3.1.1
photosynthetic 3-hydroxybutanoate biosynthesis (engineered) PWY-7218 5.3.1.1
superpathway of anaerobic sucrose degradation PWY-7345 5.3.1.1

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "more" button next to the name of that material.
AA Sequence
MSPNIRPFIA GNWKMNGTGE SLGELRAIAA GISSDLGRLF EALICVPATL LSRAFDILGG ENILLGGQNC HFDDYGPYTG DISAFMLKEA GASHVIIGHS ERRTVYQESD AIVRAKVQAA WRAGLVALIC VGETLEERKS NKVLDVLTRQ LEGSLPDGAT AENIIIAYEP VWAVGTGNTA TSADVAEVHA FIHHKMHSRF GDEGAKIRLL YGGSVKPSNA FELLSTAHVN GALIGGASLK AIDFLTICDV YRKL

NT Sequence
ATGTCTCCAA ATATTCGACC TTTTATTGCG GGAAATTGGA AAATGAATGG AACTGGTGAA TCTCTTGGAG AATTACGTGC CATTGCCGCT GGCATTAGCT CTGATTTAGG TCGTTTGTTT GAAGCGCTTA TTTGTGTTCC AGCAACGCTT TTATCCCGTG CTTTTGATAT TCTGGGTGGA GAAAATATTC TCTTAGGAGG GCAAAATTGT CATTTTGATG ATTATGGTCC TTATACTGGA GATATTTCAG CTTTTATGCT TAAAGAAGCA GGAGCAAGTC ATGTCATTAT TGGGCATTCA GAGCGTCGCA CAGTTTATCA GGAAAGTGAT GCAATTGTTC GTGCTAAAGT GCAAGCGGCA TGGCGAGCAG GTCTTGTTGC TCTTATTTGT GTTGGAGAAA CATTGGAAGA ACGCAAAAGT AATAAAGTGT TGGATGTGCT TACGCGGCAA CTTGAAGGAT CTTTACCAGA TGGTGCAACA GCAGAAAATA TCATTATCGC TTATGAACCT GTATGGGCTG TAGGGACAGG CAATACAGCG ACTTCAGCAG ATGTTGCAGA GGTACATGCG TTTATTCACC ATAAGATGCA TTCTCGTTTT GGTGATGAGG GGGCCAAGAT ACGTTTGCTG TATGGTGGAT CAGTAAAACC ATCCAATGCA TTCGAGCTTC TGAGTACTGC TCATGTGAAT GGTGCTCTGA TAGGTGGAGC AAGTTTAAAA GCGATTGATT TTTTAACTAT TTGCGATGTT TATCGTAAAT TA

© 2020 Seattle Children's Research Institute. All rights reserved.