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Seattle Structural Genomics Center for Infectious Disease

BobuA.00444.a: glyceraldehyde 3-phosphate dehydrogenase (gap) (BB_0057)

Target Characteristics

from organism: Borrelia burgdorferi B31
most recent status: in PDB
center reference id: BobuA.00444.a
is community request: True
associated disease: Lyme disease
NIH risk group: 2
is select agent: False
NIH priority
pathogens category:
I

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
BobuA.00444.a.A1.GE26187 Full length( BobuA.00444.a ) 1 335 GE26187
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.

Proteins

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
BobuA.00444.a.A1.PW26245 Full length( BobuA.00444.a ) 1 335

Structures

image of structure for 3HJA
3HJA
Deposited: 5/21/2009
Determination: XRay
Diffraction Image
Clone: BobuA.00444.a.A1.GE26187
Protein: BobuA.00444.a.A1.PW26245

Citations by Others


This list was obtained from Google Scholar searches using the Open Source tool https://github.com/ckreibich/scholar.py and each citation has been manually reviewed.

External Resources

Resource Reference ID
OrthoMCL: OG5_126628
PATRIC ID: fig|224326.49.peg.455
RefSeq: NP_212191.1
UniProt: P46795

Enzyme & Pathway Information

Pathway Pathway ID EC Number
homolactic fermentation ANAEROFRUCAT-PWY 1.2.1.12
glycolysis III (from glucose) ANAGLYCOLYSIS-PWY 1.2.1.12
gluconeogenesis I GLUCONEO-PWY 1.2.1.12
glycolysis I (from glucose 6-phosphate) GLYCOLYSIS 1.2.1.12
superpathway of glycolysis and the Entner-Doudoroff pathway GLYCOLYSIS-E-D 1.2.1.12
superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass GLYCOLYSIS-TCA-GLYOX-BYPASS 1.2.1.12
superpathway of hexitol degradation (bacteria) HEXITOLDEGSUPER-PWY 1.2.1.12
heterolactic fermentation P122-PWY 1.2.1.12
Bifidobacterium shunt P124-PWY 1.2.1.12
formaldehyde assimilation III (dihydroxyacetone cycle) P185-PWY 1.2.1.12
superpathway of N-acetylneuraminate degradation P441-PWY 1.2.1.12
hexitol fermentation to lactate, formate, ethanol and acetate P461-PWY 1.2.1.12
glycolysis IV (plant cytosol) PWY-1042 1.2.1.12
superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle PWY-5464 1.2.1.12
glycolysis II (from fructose 6-phosphate) PWY-5484 1.2.1.12
gluconeogenesis III PWY66-399 1.2.1.12
glycolysis VI (metazoan) PWY66-400 1.2.1.12
superpathway of glucose and xylose degradation PWY-6901 1.2.1.12
glycerol degradation to butanol PWY-7003 1.2.1.12
superpathway of anaerobic sucrose degradation PWY-7345 1.2.1.12
sucrose biosynthesis I (from photosynthesis) SUCSYN-PWY 1.2.1.12

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "more" button next to the name of that material.
AA Sequence
MKLAINGFGR IGRNVFKIAF ERGIDIVAIN DLTDPKTLAH LLKYDSTFGV YNKKVESRDG AIVVDGREIK IIAERDPKNL PWAKLGIDVV IESTGVFSSA TSDKGGYLDH VNHAGAKKVI LTVPAKDEIK TIVLGVNDHD INSDLKAVSN ASCTTNCLAP LAKVLHESFG IEQGLMTTVH AYTNDQRILD LPHSDLRRAR AAALSIIPTS TGAAKAVGLV LPELKGKLNG TSMRVPVPTG SIVDLTVQLK KKDVTKEEIN SVLRKASETP ELKGILGYTE DPIVSSDIKG NSHSSIVDGL ETMVLENGFA KILSWYDNEF GYSTRVVDLA QKLVK

NT Sequence
ATGAAATTGG CTATTAATGG CTTTGGGCGT ATTGGTAGAA ATGTTTTTAA GATTGCTTTT GAAAGAGGAA TTGATATTGT CGCAATAAAT GATTTAACAG ATCCTAAAAC TCTTGCACAT CTTTTAAAGT ATGATTCGAC TTTTGGAGTA TATAATAAAA AAGTTGAGTC AAGAGATGGT GCCATTGTTG TGGATGGAAG AGAAATAAAA ATTATTGCTG AGAGAGACCC AAAAAATCTT CCTTGGGCAA AGCTTGGAAT TGATGTTGTA ATTGAGTCAA CAGGTGTTTT TTCATCAGCA ACTAGTGATA AAGGGGGATA TCTTGATCAT GTGAATCATG CTGGGGCTAA GAAAGTTATT TTAACAGTTC CTGCTAAAGA CGAGATTAAA ACAATAGTTC TTGGTGTAAA TGATCACGAT ATTAATTCTG ATTTAAAGGC TGTGTCAAAT GCTTCATGTA CAACCAATTG CTTGGCTCCT CTTGCAAAAG TACTTCATGA ATCATTTGGA ATTGAACAAG GACTTATGAC AACAGTTCAT GCTTATACTA ATGATCAAAG AATTTTGGAT CTTCCTCATT CTGATCTTAG ACGGGCAAGA GCTGCTGCAC TTTCTATTAT TCCAACTTCA ACCGGTGCTG CAAAAGCAGT TGGACTTGTT TTGCCCGAAC TTAAGGGTAA GTTGAATGGT ACTTCAATGA GGGTGCCTGT GCCAACAGGT TCAATAGTTG ACCTTACAGT TCAACTTAAG AAAAAGGATG TTACAAAAGA AGAGATTAAT TCTGTGCTCA GGAAGGCATC AGAAACGCCT GAGCTTAAAG GTATTTTGGG GTACACGGAA GATCCAATTG TATCTTCAGA TATAAAGGGG AATTCTCATT CTTCTATTGT TGATGGTCTT GAGACAATGG TTCTTGAAAA TGGATTTGCA AAGATATTGT CATGGTATGA CAATGAGTTT GGATATTCTA CAAGAGTGGT TGATCTTGCT CAAAAATTGG TAAAA

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