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Seattle Structural Genomics Center for Infectious Disease

BobuA.01478.a: plasmid partition protein, putative (BB_S35)

Target Characteristics

from organism: Borrelia burgdorferi B31
most recent status: in PDB
center reference id: BobuA.01478.a
is community request: True
associated disease: Lyme disease
NIH risk group: 2
is select agent: False
NIH priority
pathogens category:
I

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
BobuA.01478.a.A1.GE26792 Full length( BobuA.01478.a ) 1 246 GE26792
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.

Proteins

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
BobuA.01478.a.A1.PS00305 Full length( BobuA.01478.a ) 1 246

Structures

image of structure for 3K9G
3K9G
Deposited: 10/15/2009
Determination: XRay
Diffraction Image
Clone: BobuA.01478.a.A1.GE26792
Protein: BobuA.01478.a.A1.PS00305
image of structure for 3K9H
3K9H
Deposited: 10/15/2009
Determination: XRay
Diffraction Image
Clone: BobuA.01478.a.A1.GE26792
Protein: BobuA.01478.a.A1.PS00305
image of structure for 5TVK
5TVK
Deposited: 11/9/2016
Determination: XRay
Diffraction Image
Clone: BobuA.01478.a.A1.GE26792
Protein: BobuA.01478.a.A1.PS00305

Publications by SSGCID

SAD phasing using iodide ions in a high-throughput structural genomics environment.
Abendroth J, Christensen JS, Edwards TE, Gardberg AS, Myler PJ, Robinson JI, Staker BL, Stewart LJ
J. Struct. Funct. Genomics - 2011
volume 12, issue 2, pages 83-95
PMID: 21359836; PMCID: PMC3123459

Citations by Others

Substructure determination using phase-retrieval techniques
P Skubk- Acta Crystallographica Section D: Structural Biology, 2018 - scripts.iucr.org
cited by: 5 others
PDB: 3K9G
Macromolecular X-ray structure determination using weak, single-wavelength anomalous data
G Bunkóczi, AJ McCoy, N Echols… - Nature …, 2014 - nature.com
PDB: 3K9G
Molecular anatomy of ParA-ParA and ParA-ParB interactions during plasmid partitioning
A Volante, JC Alonso - Journal of Biological Chemistry, 2015 - ASBMB
PDB: 3K9H

This list was obtained from Google Scholar searches using the Open Source tool https://github.com/ckreibich/scholar.py and each citation has been manually reviewed.

External Resources

Resource Reference ID
OrthoMCL: OG5_130366
PATRIC ID: fig|224326.49.peg.75
RefSeq: NP_051238.1
UniProt: O68233

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "more" button next to the name of that material.
AA Sequence
MDNKKPKIIT IASIKGGVGK STSAIILATL LSKNNKVLLI DMDTQASITS YFYEKIEKLG INFTKFNIYE ILKENVDIDS TIINVDNNLD LIPSYLTLHN FSEDKIEHKD FLLKTSLGTL YYKYDYIVID TNPSLDVTLK NALLCSDYVI IPMTAEKWAV ESLDLFNFFV RKLNLFLPIF LIITRFKKNR THKTLFEILK TKDRFLGTIS EREDLNRRIA ENNNFDLNKD YIKEYENILE IFLKKI

NT Sequence
ATGGATAATA AAAAACCTAA AATAATAACA ATAGCGTCAA TTAAGGGCGG TGTAGGTAAA AGCACAAGTG CGATAATTTT GGCTACTTTA TTATCAAAAA ATAATAAAGT TCTTTTAATT GATATGGATA CTCAAGCATC TATTACTAGT TATTTTTACG AAAAAATAGA AAAACTAGGT ATTAATTTTA CCAAATTTAA TATTTATGAG ATTTTGAAAG AAAATGTAGA TATCGATAGT ACCATTATAA ATGTAGATAA TAATCTTGAT CTTATACCTA GCTATCTTAC GCTACATAAT TTTAGTGAAG ATAAAATCGA ACATAAAGAT TTTTTGTTAA AAACCAGCCT GGGAACTTTG TATTATAAAT ATGACTATAT AGTAATCGAT ACAAATCCCA GTTTAGATGT TACGTTAAAA AATGCTCTTT TATGTAGTGA CTATGTAATA ATTCCAATGA CGGCTGAAAA GTGGGCAGTG GAAAGTTTAG ATTTATTTAA TTTCTTTGTA AGAAAATTAA ATTTATTTTT ACCTATATTT TTGATAATAA CAAGATTTAA AAAAAATAGA ACACATAAAA CATTATTTGA AATATTAAAA ACAAAAGATA GATTTTTAGG AACAATATCT GAAAGAGAAG ACTTAAATAG ACGAATAGCA GAAAATAATA ATTTTGATTT AAATAAAGAT TATATAAAAG AATATGAAAA TATTTTAGAA ATTTTTTTAA AAAAAATA

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