NIAID Emerging and Re-emerging Infectious Diseases NIAID Bioinformatics Resource Centers NIAID Structural Genomic Centers Center for Structural Genomics of Infectious Disease
Seattle Structural Genomics Center for Infectious Disease

LpboA.00010.a: Short chain dehydrogenase

Target Characteristics

from organism: Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
most recent status: in PDB
center reference id: LpboA.00010.a
is community request: True
associated disease:
NIH risk group: 2
is select agent: False
NIH priority
pathogens category:

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
LpboA.00010.a.B1.GE41840 full length 1 255 GE41840
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.

Proteins

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
LpboA.00010.a.B1.PS38519 full length 1 255

Structures

image of structure for 6UH2
6UH2
Deposited: 9/26/2019
Determination: XRay
Diffraction Image
Clone: LpboA.00010.a.B1.GE41840
Protein: LpboA.00010.a.B1.PS38519

Molecular models

Method Results
comparative modelling Robetta_2688

External Resources

Resource Reference ID
PATRIC ID: fig|355276.3.peg.1525
UniProt: Q04TM7

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "more" button next to the name of that material.
AA Sequence
MILKNFSDEF QDKLVLITGG SGQIGSELVE SYLSVSARVI CLDPEQPSVD YKSNRFEWIQ ADITNRKEIK EIFLSLENQN KIPDILINCA GISVFTPFED RTDEEFNEVV HVNLNGTFLL SQYTFRLWKE KGKKGIILNF GSIYGVSIAD MRIYGDSGRN SPEVYAMTKA GIIHFTKYLA RYAAPYGIRV NCISPGGIFA NQSSDFIQNY IYKTPLGRMG NPSDLVGGVF FLTSSLSEYV TGQNLLIDGG FTIGD

NT Sequence
atgattttga aaaatttctc tgatgaattt caagataaac ttgttttaat tacgggtgga agtgggcaga tagggtcaga actggtagag tcatatttga gcgtatctgc tcgtgttatc tgtttagatc cagaacagcc ttcagtagat tacaaatcaa atcggttcga atggattcaa gcagacataa cgaatcgtaa agaaataaaa gagatttttt tatccttaga gaatcaaaat aaaatcccgg acatcttaat caattgtgcg gggatctctg tatttacacc ttttgaggat agaacggacg aagaatttaa cgaagtcgtg catgtaaatt tgaacgggac ttttttactc tctcaatata ctttccgtct ttggaaagaa aaagggaaga aaggaatcat tttgaacttc ggatctatct atggtgtttc gattgcagat atgagaatct atggagactc cggaagaaat agtcctgaag tgtatgcaat gacaaaagct gggatcatac attttacgaa atatctggcc agatatgctg ctccttacgg aatcagagtc aattgcatta gccctggagg aatttttgca aaccagagtt ctgattttat tcaaaattat atatataaaa cacctcttgg tagaatgggt aatccgtccg atctcgttgg tggtgttttc tttttaactt cttctctatc ggaatatgta acgggtcaga atcttctcat tgatggaggg tttacgattg gggattga

© 2020 Seattle Children's Research Institute. All rights reserved.