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Seattle Structural Genomics Center for Infectious Disease

MyavA.00762.a: Short chain dehydrogenase

Target Characteristics

from organism: Mycobacterium avium 104
most recent status: soluble
center reference id: MyavA.00762.a
is community request: False
associated disease: Johne's disease, paratuberculosis
NIH risk group: 2
is select agent: False
NIH priority
pathogens category:
IIIC

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
MyavA.00762.a.A1.GE29016 Full length( MyavA.00762.a ) 1 262 GE29016
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.

External Resources

Resource Reference ID
OrthoMCL: OG5_168406
PATRIC ID: fig|243243.7.peg.583
RefSeq: YP_879882.1
UniProt: A0A0H3A422

Enzyme & Pathway Information

Pathway Pathway ID EC Number
biotin biosynthesis I BIOTIN-BIOSYNTHESIS-PWY 1.1.1.100
(5Z)-dodecenoate biosynthesis I PWY0-862 1.1.1.100
superpathway of fatty acid biosynthesis I (E. coli) PWY0-881 1.1.1.100
arachidonate biosynthesis PWY-5353 1.1.1.100
petroselinate biosynthesis PWY-5367 1.1.1.100
cis-vaccenate biosynthesis PWY-5973 1.1.1.100
superpathway of mycolate biosynthesis PWY-6113 1.1.1.100
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) PWY-6282 1.1.1.100
superpathway of unsaturated fatty acids biosynthesis (E. coli) PWY-6284 1.1.1.100
superpathway of fatty acids biosynthesis (E. coli) PWY-6285 1.1.1.100
8-amino-7-oxononanoate biosynthesis I PWY-6519 1.1.1.100
eicosapentaenoate biosynthesis from arachidonate PWY-6940 1.1.1.100
docosahexanoate biosynthesis II PWY-6951 1.1.1.100
docosahexanoate biosynthesis I PWY-7053 1.1.1.100
gondoate biosynthesis (anaerobic) PWY-7663 1.1.1.100
oleate biosynthesis IV (anaerobic) PWY-7664 1.1.1.100
(5Z)-dodecenoate biosynthesis II PWY-7858 1.1.1.100
mycolate biosynthesis PWYG-321 1.1.1.100

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "more" button next to the name of that material.
AA Sequence
MSLSEAPKEI AGHGLLEGKV VIVTAAAGTG IGSATAKRAL AEGADVVISD HHERRLGETA DQLAALGQGR VESVLCDVTS TAQVDALFAS AHARMGRIDV LVNNAGLGGQ TPVVDMTDDE WDRVLDVTLT SVFRATRAAL RYFRDAPHGG VIVNNASVLG WRAQHSQSHY AAAKAGVMAL TRCSAIEAAE YDVRINAVSP SIARHKFLEK TSSADLLDRL SAGEAFGRAA EPWEVAATIA FLASDYSSYL TGEVISVSSQ HP

NT Sequence
ATGAGCCTGT CCGAAGCTCC GAAAGAGATT GCGGGACACG GGCTTCTGGA AGGCAAGGTG GTGATCGTCA CCGCGGCGGC CGGCACGGGT ATCGGCTCGG CGACGGCCAA ACGAGCGCTC GCCGAGGGCG CCGACGTGGT GATCTCCGAC CACCACGAGC GTCGGCTGGG CGAGACCGCC GACCAGCTCG CGGCGCTCGG CCAGGGCCGG GTGGAAAGCG TGCTGTGCGA CGTGACGTCC ACCGCCCAGG TCGATGCGCT GTTCGCGTCG GCCCACGCGC GGATGGGGCG CATCGACGTG CTGGTCAACA ACGCCGGGCT GGGCGGGCAG ACCCCGGTGG TCGACATGAC CGACGACGAG TGGGACCGGG TGCTCGATGT CACCCTGACC TCGGTTTTCC GCGCCACCCG TGCCGCGCTG CGCTACTTCC GCGACGCGCC GCACGGCGGG GTGATCGTCA ACAACGCCAG CGTGCTGGGC TGGCGGGCGC AGCACTCCCA GTCGCACTAC GCCGCCGCCA AGGCCGGGGT GATGGCGTTG ACCCGGTGCA GCGCAATCGA AGCCGCCGAG TACGACGTGC GGATCAACGC GGTGTCGCCG AGCATCGCCC GGCACAAGTT CCTGGAGAAG ACGTCGTCGG CCGACCTGCT CGACCGGCTC TCGGCCGGTG AGGCGTTCGG TCGCGCCGCC GAGCCCTGGG AGGTCGCGGC CACCATCGCG TTTTTGGCCA GCGACTACTC CAGCTACCTG ACCGGCGAGG TCATCTCGGT GTCCAGCCAG CATCCG

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