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Seattle Structural Genomics Center for Infectious Disease

MysmA.17112.b: Putative uncharacterized protein (DUF3349)

Target Characteristics

from organism: Mycobacterium smegmatis ATCC 700084 / mc(2)155
most recent status: in PDB
center reference id: MysmA.17112.b
is community request: True
associated disease:
NIH risk group: 2
is select agent: False
NIH priority
pathogens category:
IIIC

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
MysmA.17112.b.A1.GE28995 Full length( MysmA.17112.b ) 1 107 GE28995
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.

Proteins

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
MysmA.17112.b.A1.PS00691 Full length( MysmA.17112.b ) 1 107

Structures

image of structure for 2LKY
2LKY
Deposited: 10/22/2011
Determination: NMR
Clone: MysmA.17112.b.A1.GE28995
Protein: MysmA.17112.b.A1.PS00691

Publications by SSGCID

Structural diversity in the mycobacteria DUF3349 superfamily
Abendroth J, Buchko GW, Edwards TE, Myler PJ, Phan I, Robinson JI
Protein Sci. - 2019
volume 29, issue 3, pages 670-685
PDB: 2KVC, 2LKY, 2M0N, 3OL3, 3OL4

Citations by Others

Dynamic Analysis of Backbone-Hydrogen-Bond Propensity for Protein Binding and Drug Design
CA Menndez, SR Accordino - Biopolymers for , 2016 - crcnetbase.com
PDB: 2LKY
Protein packing defects heat up interfacial water
MB Sierra, SR Accordino, JA Rodriguez-Fris? - The European Physical Journal E, 2013 - Springer
cited by: 5 others
PDB: 2LKY

This list was obtained from Google Scholar searches using the Open Source tool https://github.com/ckreibich/scholar.py and each citation has been manually reviewed.

External Resources

Resource Reference ID
OrthoMCL: OG5_237778
PATRIC ID: fig|246196.19.peg.1050
RefSeq: YP_885459.1
UniProt: A0QRC1

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "more" button next to the name of that material.
AA Sequence
MNAFLAKIAA WLNAGYPEGV PGPDRVPLLA LLTRRLTNDE IKAIAEDLEK RAHFDHIDIG VLITQMTDEM PREEDIERVR RHLALQGWPL DDPRDGEEPD GESGGPR

NT Sequence
GTGAACGCAT TTCTCGCCAA GATCGCGGCC TGGCTCAACG CCGGGTACCC CGAGGGCGTG CCCGGCCCCG ACCGGGTGCC GCTGCTGGCA TTGTTGACCC GTCGGCTCAC CAACGACGAG ATCAAGGCCA TCGCGGAGGA TCTGGAGAAA CGTGCTCACT TCGACCACAT CGACATCGGC GTGCTGATAA CCCAGATGAC CGACGAGATG CCACGCGAAG AGGACATCGA GCGTGTGCGC AGGCATCTCG CGTTGCAGGG CTGGCCGCTC GACGATCCGC GCGACGGCGA GGAGCCCGAC GGTGAATCGG GAGGCCCGCG A

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