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Seattle Structural Genomics Center for Infectious Disease

MytuD.00762.a: short chain dehydrogenase

Target Characteristics

from organism: Mycobacterium tuberculosis H37Rv
most recent status: cloned
center reference id: MytuD.00762.a
is community request: False
associated disease: Tuberculosis
NIH risk group: 2
is select agent: False
NIH priority
pathogens category:
IIIC

Ordering Clones & Proteins

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External Resources

Resource Reference ID
OrthoMCL: OG5_168406
PATRIC ID: fig|83332.12.peg.3973
RefSeq: NP_218076.1
TubercuList: Rv3559c
MTB Network Portal: Rv3559c
UniProt: I6YCF0

Orthologues for Rv3559c

Species % Identity % Coverage Clones Proteins Structures
marinum 95 100 1 1 0
ulcerans 95 100 1 1 0
avium 91 100 1 0 0
smegmatis 85 99 1 1 1
thermoresistibile 83 74 1 0 0
abscessus 82 99 1 0 0
avium 33 92 0 0 0

Enzyme & Pathway Information

Pathway Pathway ID EC Number
biotin biosynthesis I BIOTIN-BIOSYNTHESIS-PWY 1.1.1.100
(5Z)-dodecenoate biosynthesis I PWY0-862 1.1.1.100
superpathway of fatty acid biosynthesis I (E. coli) PWY0-881 1.1.1.100
arachidonate biosynthesis PWY-5353 1.1.1.100
petroselinate biosynthesis PWY-5367 1.1.1.100
cis-vaccenate biosynthesis PWY-5973 1.1.1.100
superpathway of mycolate biosynthesis PWY-6113 1.1.1.100
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) PWY-6282 1.1.1.100
superpathway of unsaturated fatty acids biosynthesis (E. coli) PWY-6284 1.1.1.100
superpathway of fatty acids biosynthesis (E. coli) PWY-6285 1.1.1.100
8-amino-7-oxononanoate biosynthesis I PWY-6519 1.1.1.100
eicosapentaenoate biosynthesis from arachidonate PWY-6940 1.1.1.100
docosahexanoate biosynthesis II PWY-6951 1.1.1.100
docosahexanoate biosynthesis I PWY-7053 1.1.1.100
gondoate biosynthesis (anaerobic) PWY-7663 1.1.1.100
oleate biosynthesis IV (anaerobic) PWY-7664 1.1.1.100
(5Z)-dodecenoate biosynthesis II PWY-7858 1.1.1.100
mycolate biosynthesis PWYG-321 1.1.1.100

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "more" button next to the name of that material.
AA Sequence
MNLSVAPKEI AGHGLLDGKV VVVTAAAGTG IGSATARRAL AEGADVVISD HHERRLGETA AELSALGLGR VEHVVCDVTS TAQVDALIDS TTARMGRLDV LVNNAGLGGQ TPVADMTDDE WDRVLDVSLT SVFRATRAAL RYFRDAPHGG VIVNNASVLG WRAQHSQSHY AAAKAGVMAL TRCSAIEAAE YGVRINAVSP SIARHKFLDK TASAELLDRL AAGEAFGRAA EPWEVAATIA FLASDYSSYL TGEVISVSCQ HP

NT Sequence
ATGAACCTGT CCGTAGCGCC GAAAGAGATT GCCGGACATG GACTTCTGGA TGGCAAGGTG GTCGTCGTGA CGGCGGCTGC GGGCACCGGC ATCGGTTCGG CCACCGCGCG GCGAGCCTTG GCGGAGGGCG CCGACGTGGT GATCTCGGAC CACCATGAAC GACGGCTGGG GGAGACGGCC GCCGAGTTGT CTGCGCTGGG GCTGGGCCGG GTGGAGCATG TGGTGTGCGA CGTGACGTCC ACCGCCCAGG TCGACGCGCT GATCGACTCG ACCACCGCCC GGATGGGCCG GCTCGACGTG CTGGTCAACA ACGCCGGGCT GGGCGGGCAG ACGCCGGTGG CCGACATGAC CGACGACGAG TGGGACCGCG TGTTAGACGT GAGCCTGACG TCGGTGTTCC GGGCCACCCG GGCCGCATTG CGCTACTTCC GCGACGCGCC GCATGGCGGG GTGATCGTCA ACAACGCCAG CGTGCTGGGC TGGCGGGCCC AGCATTCGCA GTCGCACTAT GCCGCCGCCA AGGCCGGGGT GATGGCGTTG ACCCGGTGCA GCGCAATCGA AGCCGCCGAG TATGGGGTGC GGATCAACGC CGTCTCGCCC AGCATCGCCC GGCACAAGTT CCTGGACAAG ACCGCCTCGG CCGAGCTGCT GGACCGGCTG GCGGCCGGCG AGGCGTTCGG CCGGGCCGCC GAGCCCTGGG AGGTGGCGGC CACCATCGCG TTTCTGGCCA GCGACTACTC GAGTTACCTG ACTGGTGAGG TGATTTCGGT ATCCTGCCAG CACCCG

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