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Seattle Structural Genomics Center for Infectious Disease

MytuD.01117.a: PROBABLE ACYL-CoA DEHYDROGENASE FADE29

Target Characteristics

from organism: Mycobacterium tuberculosis H37Rv
most recent status: purified
center reference id: MytuD.01117.a
is community request: True
associated disease: Tuberculosis
NIH risk group: 2
is select agent: False
NIH priority
pathogens category:
IIIC

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
MytuD.01117.a.A1.GE25933 Full length( MytuD.01117.a ) 1 387 GE25933
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.

External Resources

Resource Reference ID
OrthoMCL: OG5_239169
PATRIC ID: fig|83332.12.peg.3957
RefSeq: NP_218060.1
TubercuList: Rv3543c
MTB Network Portal: Rv3543c
UniProt: P71858

Orthologues for Rv3543c

Species % Identity % Coverage Clones Proteins Structures
marinum 90 100 0 0 0
ulcerans 90 100 1 0 0
paratuberculosis 88 100 1 1 0
thermoresistibile 82 77 1 0 0
smegmatis 78 100 0 0 0
abscessus 75 100 0 0 0
avium 33 73 1 1 0
paratuberculosis 33 73 1 0 0

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "more" button next to the name of that material.
AA Sequence
MFIDLTPEQR QLQAEIRQYF SNLISPDERT EMEKDRHGPA YRAVIRRMGR DGRLGVGWPK EFGGLGFGPI EQQIFVNEAH RADVPLPAVT LQTVGPTLQA HGSELQKKKF LPAILAGEAH FAIGYTEPEA GTDLASLRTT AVRDGDHYIV NGQKVFTTGA HDADYIWLAC RTDPNAAKHK GISILIVDTK DPGYSWTPII LADGAHHTNA TYYNDVRVPV DMLVGKENDG WRLITTQLNN ERVMLGPAGR FASIYDRVHA WASVPGGNGV TPIDHDDVKR ALGEIRAIWR INELLNWQVA SAGEDINMAD AAATKVFGTE RVQRAGRLAE EIVGKYGNPA EPDTAELLRW LDAQTKRNLV ITFGGGVNEV MREMIAASGL KVPRVPR

NT Sequence
ATGTTCATTG ACCTGACGCC GGAGCAGCGC CAGCTGCAAG CCGAGATACG GCAATACTTT TCGAATCTCA TCTCGCCCGA CGAGCGCACG GAGATGGAGA AAGACCGGCA CGGCCCGGCC TACCGTGCGG TGATACGGCG CATGGGCCGG GACGGCAGGC TCGGTGTTGG GTGGCCGAAA GAGTTCGGCG GTCTGGGTTT TGGTCCGATC GAGCAGCAGA TCTTCGTCAA CGAGGCCCAT CGCGCCGACG TGCCGCTGCC CGCGGTGACG CTGCAGACCG TCGGCCCCAC GCTGCAGGCG CACGGCAGCG AGCTGCAGAA GAAGAAGTTC CTGCCGGCGA TCCTGGCCGG TGAGGCGCAC TTCGCGATCG GCTACACCGA GCCGGAAGCC GGCACCGACC TGGCGTCGTT GCGCACCACC GCCGTTCGCG ACGGCGACCA CTACATCGTC AACGGCCAGA AGGTCTTCAC CACCGGCGCA CACGACGCCG ACTACATCTG GCTGGCCTGC CGCACCGACC CGAATGCCGC TAAGCACAAA GGCATTTCCA TTCTAATCGT CGACACCAAG GATCCCGGCT ATTCCTGGAC GCCGATCATC TTGGCCGACG GCGCCCACCA CACCAATGCC ACGTACTACA ACGACGTGCG CGTGCCGGTC GACATGCTGG TCGGAAAGGA GAACGACGGC TGGCGGCTGA TCACCACCCA ACTCAACAAC GAACGGGTAA TGCTCGGCCC GGCCGGGCGG TTCGCCAGCA TCTACGACCG GGTGCACGCG TGGGCGTCCG TGCCGGGTGG CAACGGCGTG ACGCCGATCG ACCACGACGA CGTCAAGCGG GCTCTTGGTG AGATTCGTGC GATCTGGCGG ATCAACGAGT TGCTCAACTG GCAGGTAGCG TCCGCCGGTG AGGACATCAA CATGGCCGAT GCCGCGGCCA CGAAAGTCTT TGGCACCGAG CGTGTTCAGC GTGCCGGCCG GCTCGCCGAG GAAATCGTTG GCAAGTACGG CAACCCCGCC GAACCCGACA CCGCCGAGCT ACTGCGCTGG CTGGACGCCC AGACCAAGCG CAACCTGGTG ATCACCTTCG GCGGGGGTGT GAACGAAGTC ATGCGCGAGA TGATCGCCGC GTCTGGCCTC AAAGTGCCAA GGGTGCCCAG G

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