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Seattle Structural Genomics Center for Infectious Disease

SSGCID Target Status By Genus

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Cumulative Total 17095 14549 12748 9623 7072 4699 2229 1085 102 62 1051 1798 10110 4114
Bacteria Acinetobacter 359 342 306 203 176 130 53 31 0 0 30 31 268 109 2/25/2021
Bacteria Anaplasma 228 228 193 160 97 76 23 11 4 1 12 13 163 73 6/3/2020
Bacteria Aquifex 1 1 1 1 1 1 0 0 0 0 0 0 6 0 10/25/2017
Bacteria Bacillus 4 4 2 2 2 2 1 0 0 0 0 0 0 0 7/19/2016
Bacteria Bartonella 544 537 491 412 331 221 82 48 5 3 46 31 582 204 1/17/2021
Bacteria Bordetella 2 2 1 0 0 0 0 0 0 0 0 0 0 0 12/2/2016
Bacteria Borrelia 611 567 482 287 201 119 40 13 5 2 15 58 294 111 3/3/2021
Bacteria Brucella 1319 1142 1053 829 625 390 217 106 6 4 97 176 859 384 1/14/2021
Bacteria Burkholderia 3590 2932 2700 2153 1708 1019 558 277 15 9 263 669 1956 951 3/3/2021
Bacteria Campylobacter 3 3 3 3 3 3 0 0 3 0 0 0 0 0 12/18/2019
Bacteria Chlamydia 102 98 97 56 42 31 11 9 0 0 8 0 67 20 3/1/2021
Bacteria Clostridium 4 4 2 2 2 2 1 1 0 0 1 0 0 0 7/23/2014
Bacteria Coxiella 1 0 0 0 0 0 0 0 0 0 0 0 0 0 7/28/2014
Bacteria Ehrlichia 204 204 143 114 93 60 27 11 4 4 15 10 120 62 2/15/2020
Bacteria Elizabethkingia 118 118 107 89 86 78 44 28 0 0 27 2 84 63 2/22/2021
Bacteria Enterobacter 1 1 1 1 1 1 0 0 0 0 0 0 0 0 10/16/2019
Bacteria Escherichia 8 8 8 8 8 8 1 1 1 1 2 2 4 0 2/20/2021
Bacteria Francisella 11 10 10 10 8 7 2 0 0 0 0 1 15 11 6/13/2017
Bacteria Helicobacter 176 175 157 106 83 56 26 12 0 0 11 4 121 48 2/25/2021
Bacteria Klebsiella 236 73 5 4 4 4 1 1 0 0 1 0 2 1 3/1/2021
Bacteria Kutzneria 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2/8/2016
Bacteria Legionella 92 92 79 52 46 43 32 23 0 0 23 0 57 41 9/17/2020
Bacteria Leptospira 558 324 235 163 71 45 17 9 0 0 9 5 172 33 12/16/2020
Bacteria Listeria 1 1 0 0 0 0 0 0 0 0 0 0 0 0 6/29/2011
Bacteria Micromonospora 3 3 3 3 3 3 0 0 0 0 0 0 0 0 3/28/2017
Bacteria Mycobacterium 3037 2804 2560 2035 1429 977 549 239 18 12 223 497 1988 834 3/4/2021
Bacteria Mycoplasma 544 26 23 14 11 8 4 2 0 0 2 7 19 6 2/17/2021
Bacteria Neisseria 194 194 166 123 108 88 38 28 2 1 28 3 158 89 2/17/2021
Bacteria Nitrosomonas 1 1 1 1 1 1 0 0 0 0 0 0 0 0 10/20/2020
Bacteria Pseudomonas 289 287 264 212 184 120 48 24 2 1 25 42 275 124 3/2/2021
Bacteria Rickettsia 592 567 463 338 237 172 66 22 3 3 23 57 379 178 1/22/2021
Bacteria Salmonella 3 3 3 3 3 3 2 1 0 0 1 0 7 0 11/20/2014
Bacteria Staphylococcus 3 3 2 2 1 1 1 1 0 0 1 0 2 0 7/17/2018
Bacteria Stenotrophomonas 214 199 189 118 104 60 33 24 0 0 19 1 122 37 3/4/2021
Bacteria Streptomyces 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2/8/2016
Bacteria Treponema 12 12 12 3 1 1 0 0 0 0 0 0 3 0 5/31/2011
Bacteria Verrucomicrobium 1 1 1 1 1 1 1 0 0 0 0 0 0 0 8/11/2017
Bacteria Vibrio 1 0 0 0 0 0 0 0 0 0 0 0 0 0 12/4/2019
Bacteria Wolbachia 5 5 4 4 4 0 0 0 0 0 0 0 4 0 5/4/2017
Bacteria Yersinia 1 1 1 1 1 1 1 1 0 0 0 0 0 0 8/14/2015
Eukaryota Acanthamoeba 19 19 8 4 2 2 2 1 0 0 1 0 3 2 12/2/2020
Eukaryota Ajellomyces 1 1 1 1 1 0 0 0 0 0 0 1 0 0 5/31/2011
Eukaryota artificial sequences 17 7 2 2 2 2 0 0 0 0 0 0 0 0 3/5/2021
Eukaryota Aspergillus 22 13 12 10 9 7 1 1 0 0 1 1 6 2 3/1/2021
Eukaryota Babesia 165 163 142 80 59 42 21 5 3 2 7 0 86 41 10/1/2019
Eukaryota Balamuthia 22 21 15 14 9 8 3 2 0 0 2 0 14 1 12/23/2020
Eukaryota Brugia 112 112 91 64 36 23 7 4 0 0 3 3 71 16 6/2/2020
Eukaryota Candida 26 21 21 10 8 8 2 1 0 0 1 1 8 3 1/12/2021
Eukaryota Clavispora 1 1 1 1 0 0 0 0 0 0 0 0 0 0 7/22/2020
Eukaryota Coccidioides 85 81 78 57 47 40 29 14 0 0 14 1 63 33 11/18/2020
Eukaryota Crithidia 77 75 31 21 8 4 1 0 0 0 0 1 30 0 2/17/2021
Eukaryota Cryptococcus 230 160 136 112 44 31 17 11 0 0 11 0 147 23 12/19/2020
Eukaryota Cryptosporidium 248 244 221 154 91 57 19 8 0 0 7 22 177 58 2/25/2021
Eukaryota Cunninghamella 1 1 1 1 1 0 0 0 0 0 0 0 0 0 6/28/2018
Eukaryota Cyberlindnera 1 1 1 1 1 0 0 0 0 0 0 0 0 0 7/9/2020
Eukaryota Encephalitozoon 127 126 123 113 76 55 28 9 1 1 10 3 158 56 12/18/2020
Eukaryota Entamoeba 418 412 371 227 152 96 37 17 2 0 15 18 196 105 2/29/2020
Eukaryota Giardia 138 138 134 110 91 66 25 9 4 2 11 5 84 48 3/4/2021
Eukaryota Homo 38 21 21 19 19 16 5 4 0 0 4 4 4 0 3/5/2021
Eukaryota Issatchenkia 1 1 1 1 1 0 0 0 0 0 0 0 0 0 6/28/2018
Eukaryota Lama 1 1 1 1 1 1 0 0 0 0 0 0 0 0 2/17/2021
Eukaryota Leishmania 514 448 389 277 161 113 27 10 0 0 9 8 327 73 3/8/2021
Eukaryota Malassezia 2 2 2 2 2 2 1 1 0 0 1 0 0 0 2/12/2020
Eukaryota Meyerozyma 4 4 4 2 0 0 0 0 0 0 0 0 0 0 7/22/2020
Eukaryota Moniliophthora 1 0 0 0 0 0 0 0 0 0 0 0 0 0 6/24/2020
Eukaryota Mucor 5 5 5 4 4 4 0 0 0 0 0 0 0 0 7/17/2018
Eukaryota Mus 9 5 4 4 3 3 2 2 0 0 2 1 0 0 9/28/2020
Eukaryota Naegleria 182 178 139 103 88 72 29 19 0 0 19 2 115 57 3/5/2021
Eukaryota Naumovozyma 1 1 1 0 0 0 0 0 0 0 0 0 0 0 7/22/2020
Eukaryota Onchocerca 15 15 11 10 10 7 3 1 0 0 1 0 27 11 7/12/2019
Eukaryota Plasmodium 413 331 236 131 92 51 9 4 5 2 5 24 134 33 3/4/2021
Eukaryota Pneumocystis 1 1 1 1 1 0 0 0 0 0 0 0 0 0 6/28/2018
Eukaryota Rattus 1 1 1 1 1 0 0 0 0 0 0 0 0 0 11/7/2016
Eukaryota Rhizopus 1 0 0 0 0 0 0 0 0 0 0 0 0 0 9/10/2019
Eukaryota Saccharomyces 3 3 3 2 2 1 1 1 0 0 1 1 1 1 7/22/2020
Eukaryota Saccharomycetaceae 1 1 1 1 0 0 0 0 0 0 0 0 0 0 7/22/2020
Eukaryota Sarcoptes 30 30 19 1 1 1 0 0 0 0 0 0 2 0 12/12/2017
Eukaryota Schistosoma 2 2 2 2 2 2 1 0 0 0 0 0 19 4 2/8/2021
Eukaryota Toxoplasma 260 255 152 98 56 40 18 5 1 0 5 18 158 35 3/3/2021
Eukaryota Trichinella 2 2 1 0 0 0 0 0 0 0 0 0 0 0 1/9/2013
Eukaryota Trichomonas 3 3 3 2 2 1 0 0 0 0 0 0 2 2 4/29/2016
Eukaryota Trichoplusia 1 1 1 1 1 1 1 1 0 0 1 0 0 0 7/11/2019
Eukaryota Trypanosoma 478 465 399 304 163 97 29 11 0 0 10 27 332 83 2/28/2021
Viruses Alphapapillomavirus 9 5 5 5 4 0 0 0 0 0 0 1 0 0 10/15/2015
Viruses Alphavirus 3 3 3 3 3 2 0 0 1 0 0 0 40 7 5/4/2017
Viruses Arenavirus 2 2 2 1 1 1 0 0 1 0 0 0 5 0 3/3/2013
Viruses Betacoronavirus 35 29 26 24 18 16 2 2 8 7 5 3 4 8 3/5/2021
Viruses Cuevavirus 4 2 2 2 2 2 0 0 0 0 0 0 5 0 1/14/2018
Viruses Cytomegalovirus 2 1 1 1 1 1 0 0 0 0 0 0 5 0 3/20/2019
Viruses Deltacoronavirus 1 1 1 1 1 1 0 0 1 1 1 0 0 0 4/6/2018
Viruses Ebolavirus 21 19 19 14 14 8 4 4 0 0 4 4 6 0 4/22/2020
Viruses Flavivirus 9 4 4 4 4 4 0 0 3 3 0 0 0 0 9/1/2020
Viruses Hantavirus 7 5 5 5 4 2 1 1 0 0 1 3 31 5 11/6/2015
Viruses Henipavirus 10 4 1 1 1 1 0 0 1 1 1 2 0 0 1/15/2020
Viruses Hepacivirus 12 11 11 2 2 2 1 0 0 0 0 0 5 0 11/20/2020
Viruses Influenzavirus A 113 77 75 65 65 52 21 13 1 1 14 13 31 16 8/7/2020
Viruses Influenzavirus B 2 2 2 2 2 2 0 0 0 0 0 0 0 0 8/29/2018
Viruses Influenzavirus D 15 5 5 2 2 2 0 0 0 0 0 0 0 0 5/14/2020
Viruses Lentivirus 1 1 1 0 0 0 0 0 0 0 0 1 0 0 2/28/2011
Viruses Lymphocryptovirus 3 3 3 3 3 3 0 0 1 1 1 0 0 0 5/31/2018
Viruses Lyssavirus 8 2 2 1 1 1 1 1 0 0 1 3 9 2 9/25/2012
Viruses Marburgvirus 7 3 3 3 2 1 0 0 0 0 0 4 2 0 11/7/2017
Viruses Nairovirus 4 4 3 3 2 1 0 0 0 0 0 2 28 0 1/17/2020
Viruses Orthobunyavirus 32 7 7 6 6 3 1 0 0 0 0 6 27 4 5/13/2013
Viruses Orthohepadnavirus 1 1 0 0 0 0 0 0 0 0 0 0 0 0 7/6/2015
Viruses Orthopneumovirus 1 1 1 1 1 1 0 0 0 0 0 0 0 0 4/26/2019
Viruses Orthopoxvirus 1 1 1 1 1 1 0 0 1 0 0 0 0 0 4/17/2014
Viruses Parechovirus 1 1 0 0 0 0 0 0 0 0 0 0 0 0 7/6/2015
Viruses Phlebovirus 4 3 3 3 2 1 0 0 0 0 0 3 17 0 10/23/2013
Viruses Rubulavirus 24 0 0 0 0 0 0 0 0 0 0 3 0 0 2/29/2012
Viruses unclassified Rhabdoviridae 8 8 8 8 7 6 1 0 0 0 0 0 4 6 1/25/2018
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Total Records: 111
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers.
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